Version and Change Log

Version
Table 1. Version
Type Version Number
Documentation v1.2
Schematron v1.2
Change Log
Table 2. Change Log
Date Release Changes
14/11/2024 v1.2
Documentation Changes
  • Related Articles - Updated to allow comment-on and reply-toas valid values of @related-article-type.
  • Emails - Added instructions for emails that require the author name specified.
  • CSTR ID - New topic covering instructions for capturing CSTR IDs.
  • Summary Abstract - New topic covering instructions for capturing summary abstracts.
Validation Changes
  • jats-1.3-rule-002 - Updated to allow retraction as an allowed value of @article-type on the root element.
  • jats-1.3-rule-006 - Updated to no longer enforce a ppub ISSN on the journal STMP.
  • jats-1.3-rule-055 - Updated to allow comment-on and reply-toas valid values of @related-article-type.
  • jats-1.3-rule-124 - Severity updated from a warning to an error.
  • jats-1.3-rule-125 - Added to warn when DOIs in <pub-id> include characters which may cause problems when submitted to Crossref.
  • jats-1.3-rule-126 - Added to give an error when <pub-id>[@pub-id-type=doi occurs twice in a <element-citation>.
  • jats-1.3-rule-127 - Added to give an error if <element-citation> contains more than one <fpage>, <lpage>, <elocation-id>, <year>,<volume> <source> or <isbn> child element.
  • jats-1.3-rule-128, 129, 130, 131 - Added to validate the content of <isbn> elements.
  • jats-1.3-rule-132 - Added to give an error when some descendants of <element-citation> are empty.
  • jats-1.3-rule-133 - Added to warn when the contents of <element-citation>/<edition> is longer the 16 characters.
  • jats-1.3-rule-134 - Added to warn when the contents of <funding-source> is longer the 131 characters.
Sample & Example File Changes
  • jes_171_2_020512.xml added for inclusion of @abstract-type=summary for <abstract>.
  • All articles updated to validate against the new validation rules.
28/06/2024 v1.1
Documentation Changes
  • Root Element - Updated to include retraction as an allowed value of @article-type on the root element.
  • Footnotes - Updated to reflect that a @id attribute is not required when <fn> is a child of <table-wrap-foot>.
Validation Changes
  • jats-1.3-rule-003 - Updated to no longer check for the presence of a coden code on the journal JSTAT.
  • jats-1.3-rule-006 - Updated to validate the presence of print ISSNs on the journals PMEA and PMB.
  • jats-1.3-rule-108 - Updated to allow <fn> elements that are children of <table-wrap-foot> to omit an @id attribute.
  • jats-1.3-rule-124 - Added a warning for references when the content of <pub-id> with @pub-id-type="doi" does not follow the standard pattern for a DOI.
Sample & Example File Changes
  • <colgroup> and its descendants removed from example tables to match the documentation.
26/06/2024 v1.0 Documentation Changes
  • Collection - Updated topic to correct the instructions for capturing collection information.
Validation Changes
  • jats-1.3-rule-013 - Updated to match the corrected instructions for capturing collection information.
18/04/2024 v0.3 Documentation Changes
  • Publishing Partner - New topic covering instructions for publishing partners.
  • Machine Readable Tables (MRT) - New topic covering instructions for machine readable tables.
  • Data Behind the Figure (AAS) - New topic covering instructions for capturing data behind the figure for the AAS.
  • Affiliations - Added example of unlabelled affiliations.
  • Standard Abstract - <title> child element is no longer mandatory.
  • Figure Sets - Added instructions for capturing print and online linking text.
  • Video Figures - Added instructions for capturing print and online linking text.
  • Extended Figures - Added instructions for capturing print and online linking text.
  • Interactive Figures - Added instructions for capturing print and online linking text.
  • Reference List - <title> child element is no longer mandatory.
  • Tables - Added instruction that @position must be included as an attribute of <table-wrap>.
  • Boxed Text - Added instruction that @position must be included as an attribute of <boxed-text>.
  • Graphical Abstract - Removed references to <label> and <caption> elements which are not required.
Validation Changes
  • jats-1.3-rule-017 - Updated to only check the children of <article-title> against the allowed list as opposed to a descendant of <article-title>
  • jats-1.3-rule-040 - Updated to correct the rule context on @content-type from 'suppdata' to 'supp-data'.
  • jats-1.3-rule-041 - Updated to correct the rule context on @content-type from 'suppdata' to 'supp-data'.
  • jats-1.3-rule-056 - Updated to reduce severity to a warning rather then error.
  • jats-1.3-rule-079: Updated to correct the rule context. This rule no longer applies to a <fig> elements which are part of video or graphical abstracts or is descendant of <fig-group>
  • jats-1.3-rule-080: Updated to correct the rule context. This rule no longer applies to a <fig> elements which are part of video or graphical abstracts or is descendant of <fig-group>
  • jats-1.3-rule-083 - Updated to allow <table-wrap> to have a parent <p> when it is a descendant of <abstract>
  • jats-1.3-rule-113 - Updated to only refer to missing <ref> in <ref-list>.
  • jats-1.3-rule-121 - Added rule to warn if a<title> element is missing from <ref-list>.
  • jats-1.3-rule-122: Added rule to check that machine readable tables have a valid <ext-link> child element.
  • jats-1.3-rule-123: Added rule to prevent 'suppdata' as a valid value of @content-type in <supplementary-material>.

Sample & Example File Changes

  • For clarity the default attributes below were removed from elements when not required.
    • @xml:lang="en"
    • @orientation="portrait"
    • @toggle="yes"
    • @span="1"
    • @colspan="1"
    • @rowspan="1"
    • @name-style="western"
  • <pub-date>[@pub-type="epub"] and children removed from samples where they are not required.
  • @position="float" added to <table-wrap> where it was missing
15/02/2024 v0.2 Supplier Review Version
01/11/2023 Draft Release First release of the instructions for internal review.